Chakin is a set of wrappers for accessing Chado. Each utility is implemented as a subcommand of chakin. This section of the documentation describes these commands.
chakin
add_analysis
delete_analyses
get_analyses
export_fasta
export_gbk
export_gff3
add_biomaterial
add_expression
delete_all_biomaterials
delete_biomaterial
delete_biomaterials
get_biomaterials
delete_features
get_feature_analyses
get_feature_cvterms
get_features
load_fasta
load_featureprops
load_gff
load_go
blast
go
interpro
add_organism
delete_all_organisms
delete_organisms
get_organisms
add_cvterms
gene_families
gene_order
load_tree
dbshell
launch_docker_image